Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908653.1_cds_XP_016458831.1_52421
CDS Infomation

[gene=LOC107782459] [db_xref=GeneID:107782459] [protein=mannan endo-1,4-beta-mannosidase 5-like] [protein_id=XP_016458831.1] [location=complement(join(71503..71980,72336..72538,72648..72770,72881..73075,73523..73855))] [gbkey=CDS]
Sequence

ATGGCTTCTTTTACTAGAGCATTAAGCTCATTCTTTGCCCTCCTCCTCCTCCTAGCTATT
GCAACAGAAGCTAGGAATCTTAATAAATTAGGGTTTGTTAGAACAAAAGGAGCCCATTTT
GTACTAAATGGATCACCATTTCTATTCAATGGTTTCAACTCGTATTGGCTAATGCATGTT
GCAGCTGATCCAACTGAGAGATACAAAGTCTCAGAGGTTTTTCAGGAAGCCTCTGCTGCT
AGCCTTTCTGTATGCAGGACTTGGGCTTTTAGCGATGGAGGTGATACTGCATTACAAATA
TCTCCTGGAGTCTACGATGAACGTGTTTTTCAGGGATTGGATTTTGTGATCTCGGAAGCA
AAAAAGTATGGTATACGTTTAATATTGAGCTTTGTGAATAACTACAAAGATTTTGGAGGA
AGAAATCAATATGCTCAATGGGGGAGAAATGCAGGAATTCAGATTAACAGTGATGATGAT
TTTTATACTCATCCAGTTCTTAAAGATTATTACAAGAACCATGTTAAGAAAGTAGTGACA
AGAGTCAATACCATGACTGGAATAGCATACAGGGATGACACAACAATAATGGCATGGGAA
CTTATGAATGAGCCTCGTTGCGATGCTGATTATTCTGGGAAAACAGTTCATGGATGGGTT
CAGGGGATGGCTAGTTTTGTAAAATCACTGGACAGAAAACACTTGCTGGAGATAGGAATG
GAGGGATTTTATGGCGACTCAATGCCTGAAAAGAAACAGTTTAATCCTGGTTACCAAGTT
GGAACAGATTTCATCAGCAGCAATCTTATTAGGGAGATCGACTTTGCCACTATACATGCA
TATACTGACCAATGGTTGTCAGGACAAAGTGATGATGCTCAAGGAGTATTCATGCAAAGG
TGGATGACAAGTCATTGGCAAGATTCAAGAACAATATTAAAGAAGCCATTGGTGCTAGCT
GAATTTGGAAAGTCTAGCAAAGATCCAGGATACAATCAAAATGTAAGAGACACATTCATG
AGTTCAGTTTACAGAAATGTGTATAATTTCGCGAAAGCGGGAGGAACTATGGCAGGAAGC
TTAATATGGCAACTGGTAGCACAAGACATGAGCAATTTTGACGACGGTTACTCAATTATC
TTAGCCCAAAATCCTTCAACTGCAGGACTCATTTCAGGCCAATCTCATGCCATGACAGCT
TTGGCTCATTTGGTTAATAGCCCTCATGTTTATCCTTTTAGCCAGTCAAATGGAGTTCCT
ATTCATGGCCATCATCCATTAGGTGTTGGACATCACCCATTGGGAGTGGGACATCATCGT
TTTGGTCGATGA

Peptide Sequence

PEP ID

XP_016458831.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 5-like [Nicotiana tabacum]
Sequence

MASFTRALSSFFALLLLLAIATEARNLNKLGFVRTKGAHFVLNGSPFLFNGFNSYWLMHV
AADPTERYKVSEVFQEASAASLSVCRTWAFSDGGDTALQISPGVYDERVFQGLDFVISEA
KKYGIRLILSFVNNYKDFGGRNQYAQWGRNAGIQINSDDDFYTHPVLKDYYKNHVKKVVT
RVNTMTGIAYRDDTTIMAWELMNEPRCDADYSGKTVHGWVQGMASFVKSLDRKHLLEIGM
EGFYGDSMPEKKQFNPGYQVGTDFISSNLIREIDFATIHAYTDQWLSGQSDDAQGVFMQR
WMTSHWQDSRTILKKPLVLAEFGKSSKDPGYNQNVRDTFMSSVYRNVYNFAKAGGTMAGS
LIWQLVAQDMSNFDDGYSIILAQNPSTAGLISGQSHAMTALAHLVNSPHVYPFSQSNGVP
IHGHHPLGVGHHPLGVGHHRFGR

Transcript Sequence

Gene sequence data has not been registered.